Gluten-Free Almond Flour Pumpkin Muffins

Irresistibly Moist Gluten-Free Almond Flour Pumpkin Muffins with Crunchy Streusel Topping

Get ready to embrace the flavors of autumn with these incredible Gluten-Free Almond Flour Pumpkin Muffins. Loaded with pure pumpkin and a warm blend of fall spices, these easy blender muffins are not only deliciously fluffy but also entirely grain-free and dairy-free. They are the perfect healthy breakfast or snack that will make your entire house smell absolutely amazing, ushering in the cozy vibes of the season!

Tray of pumpkin muffins. One is cut open to see the texture.

This almond flour pumpkin muffin recipe delivers everything you could wish for in a homemade muffin: a soft, moist interior, and a perfectly crunchy streusel top. It’s an easy gluten-free pumpkin muffin recipe that makes all your fresh-baked dreams come true. Each bite is infused with the comforting essence of warm fall spices, creating a tender, flavorful muffin that’s surprisingly full of nutritious ingredients. Unlike traditional baked goods that often lead to a post-sugar crash, this grain-free version is designed to be gentler on your blood sugar, providing sustained energy. It’s truly an ideal choice for anyone seeking a healthy, satisfying breakfast or a wholesome snack.

Why You’ll Absolutely Love These Healthy Almond Flour Pumpkin Muffins

Pumpkin muffin cut in half so the inside texture is seen.
  • Effortlessly Easy: Forget complicated baking! This simple blender recipe takes just 5 minutes of active preparation time. All you do is toss the ingredients in, blend, and you’re ready to fill your muffin tin. It’s perfect for busy mornings or when you crave a homemade treat without the fuss.
  • Fabulous Fall Aroma: Beyond their incredible taste, these muffins will fill your home with the most delightful autumn scents. The warm spices and pumpkin baking in the oven create an inviting atmosphere that is truly divine and utterly comforting.
  • Excellent for Meal Prep: Make a batch (or even a double batch!) of these healthy pumpkin muffins when you have a few extra minutes. They’re the perfect grab-and-go breakfast or healthy snack to have on hand throughout the week, saving you time and ensuring you always have a wholesome option available.
  • Freezer-Friendly Delight: You’ll be incredibly happy to find a gluten-free pumpkin muffin waiting for you in the freezer. These muffins freeze beautifully for up to 3 months, making them an ideal make-ahead option. Simply thaw at room temperature for a quick treat.
  • Made with Pantry Staples: This recipe calls for simple, wholesome ingredients you likely already have in your kitchen. No need for special grocery trips – just common pantry items transformed into extraordinary muffins.
  • Simply Delicious: Everyone, and we mean everyone, loves these muffins! Despite being made without traditional flour or added sugar, they are wonderfully fluffy, moist, and bursting with flavor. Many won’t even realize they’re a healthier, grain-free alternative!
  • Diet-Conscious & Wholesome: These muffins are genuinely free of added refined sugar, dairy, and grains, making them suitable for various dietary needs and health-conscious lifestyles. Enjoy a sweet, comforting treat that truly supports your well-being.
  • Perfect for Holiday Gatherings: These healthy pumpkin muffins make a fantastic addition to your holiday traditions. They’re quick and easy to prepare, making them ideal for Thanksgiving snacks, a cozy Christmas breakfast, or any festive occasion. This allows you to spend more precious time with family and less time stressing in the kitchen.

Key Ingredients and Smart Substitutions for Your Pumpkin Muffins

Labeled ingredients: pumpkin puree, ground flax, almond flour, eggs, almond butter, honey, spices, streusel topping.
  • Pumpkin Puree: It’s crucial to use pure pumpkin puree, not pumpkin pie filling. Pie filling often contains added sugars and spices that would alter the recipe. Look for an organic brand with only one ingredient: pumpkin. Pumpkin is a nutritional powerhouse, packed with vitamins like A, minerals like potassium, and iron, contributing both flavor and health benefits.
  • Almond Flour: This is the foundation of our grain-free muffins. Almond flour offers a lower carbohydrate content and higher nutritional value than traditional wheat flour, providing protein and healthy fats. It’s essential for achieving the perfectly tender, moist texture that these gluten-free muffins are known for.
  • Almond Butter: Adding almond butter provides richness, healthy monounsaturated fats, and acts as a binder, contributing to the muffins’ structure. It’s also a good source of vitamin E, magnesium, protein, and fiber. For substitutions, peanut butter or sunflower seed butter (sunbutter) work well, though they will slightly alter the flavor.
  • Ground Flaxseed: A fantastic source of omega-3 fatty acids and dietary fiber. Ground flax also helps bind the ingredients, enhancing the muffin’s texture and moisture. If you don’t have flax, ground chia seeds can be used as an equal substitute.
  • Eggs: Eggs are vital for both structure and moisture in these healthy pumpkin muffins. They help create a beautifully fluffy texture and are a great source of protein and vitamin B12.
  • Apple: One small apple, cored and roughly chopped, contributes natural sweetness, fiber, and an extra boost of moisture. If you prefer or need to, ¼ cup of unsweetened applesauce can be directly swapped for the fresh apple, especially if you’re mixing by hand.
  • Honey: Our natural sweetener of choice. Honey’s rich flavor complements the pumpkin and spices wonderfully. Pure maple syrup is also an excellent unrefined alternative if you prefer.
  • Baking Soda: This leavening agent is critical for helping the muffins rise and ensuring they have a light, airy crumb.
  • Warm Fall Spices: A comforting blend of cinnamon, ground ginger, ground allspice, and nutmeg defines the quintessential autumn flavor of these muffins. To make your baking even easier, consider preparing a batch of homemade pumpkin pie spice in advance. This ensures every bite is bursting with rich, aromatic warmth.

Crafting Your Delicious Blender Pumpkin Muffins: A Simple Guide

One of the greatest advantages of this recipe is its incredible simplicity. Honestly, even if these healthy almond flour pumpkin muffins weren’t so easy to make, I would still bake them regularly because they are truly THAT GOOD. But the fact that they come together in mere minutes is an added bonus! The secret to their effortless preparation largely lies in your blender.

Ingredients in a blender: apple slices, almond flour, spices, eggs.
Blender pitcher with pumpkin muffin batter.

Simply gather all the muffin ingredients and literally throw them into your blender. With just a few pulses and a minute or two of blending, you’ll have a smooth, perfectly mixed batter. I always make sure to stop and scrape down the sides a couple of times during blending, just to ensure every last bit is thoroughly incorporated and the batter is uniform. That’s all there is to it – minimal effort for maximum deliciousness!

No Blender? No Problem! Alternative Methods for Delicious Muffins

Don’t have a high-speed blender or prefer not to use one? You can still absolutely make these incredible gluten-free pumpkin muffins! Here are two easy alternative methods:

  • Food Processor Method: A food processor works wonderfully for this recipe. Simply add all the muffin ingredients into your food processor and process until the mixture is smooth and well combined. Just like with a blender, you might need to stop and scrape down the sides a few times to ensure everything is evenly incorporated.
  • Mixing by Hand: If you’re opting for the traditional hand-mixing route, a small adjustment will make the process smoother. Instead of using a fresh, chopped apple, swap it for ¼ cup of unsweetened applesauce. This ensures a uniform, smooth batter that’s easier to achieve without a powerful appliance. First, combine all the wet ingredients (pumpkin puree, almond butter, honey, eggs, applesauce) in a large bowl and whisk until smooth. In a separate bowl, whisk together the dry ingredients (almond flour, ground flax, baking soda, and all the spices). Gradually add the dry mixture to the wet mixture, stirring until just combined and no dry streaks remain. Be careful not to overmix!

Preparing Your Muffin Tin for Easy Release

Muffin tin with strips of parchment paper before filling.

Before you even begin mixing the batter, proper preparation of your muffin tin is essential to ensure your gluten-free almond flour pumpkin muffins release perfectly without sticking. My preferred method, which is both effective and eco-friendly, involves using unbleached parchment paper. Simply cut the parchment paper into strips, approximately ½ inch wide and long enough to cross the muffin cup, creating an “X” shape within each cup. This clever technique is easy, inexpensive, and eliminates the need for any additional oils or sprays, guaranteeing a clean and effortless release every single time.

While using standard muffin liners is another option, I’ve often found that a portion of the muffin can stick to the liner when peeled off, meaning you lose some of that deliciousness. The parchment strip method expertly prevents this, leaving you with perfectly intact and beautiful muffins. Once your muffin tin is meticulously prepared, evenly divide all the batter among the 12 muffin cups. Don’t hesitate to fill them almost to the top; these healthy pumpkin muffins will rise beautifully, but not excessively, ensuring you achieve full, satisfying muffin tops.

Pumpkin muffin batter, poured into muffin tins lined with parchment paper strips.

The Perfect Crunchy Streusel Topping for Your Almond Flour Pumpkin Muffins

Elevate your gluten-free pumpkin muffins to an even higher level of deliciousness with this delightful streusel topping. It’s incredibly easy to prepare – simply mix the ingredients with a fork in a small bowl. This irresistible concoction combines crunchy pepitas (pumpkin seeds), additional almond flour for texture, a hint of warm spices, and a touch of honey, creating a topping that perfectly complements and enhances these wholesome, grain-free muffins. The streusel adds a wonderful textural contrast – a sweet, crispy layer that beautifully balances the soft, fluffy interior of the muffins, making every bite an absolute pleasure and adding that extra special touch.

When it comes to applying the streusel, you might notice it can be a bit sticky to work with. A simple yet effective trick is to use damp hands to scatter the topping evenly over each muffin. Re-wet your hands as needed to prevent the streusel from clinging to your fingers, ensuring an even, attractive, and delicious distribution on every single muffin.

Pumpkin muffns with streusel topping muffin tins lined with parchment paper strips.
Pumpkin muffins with streusel topping baked in a tin.

Baking and Cooling for Optimal Muffin Texture

Once topped with the delightful streusel, your healthy pumpkin muffins are ready to bake. Place them in a preheated 350°F (175°C) oven and bake for approximately 25 to 28 minutes. You’ll know they’re perfectly done when a toothpick inserted into the center of a muffin comes out clean. Be mindful not to overbake, as this can lead to drier muffins; we want them to retain their beautiful moisture!

After baking, the cooling process is just as important for achieving the perfect texture. Let the muffins cool in the tin for about 15 minutes. This crucial step allows them to set and firm up slightly before you handle them. Then, gently lift each muffin out of the tin using the parchment paper strips as convenient handles. Carefully peel off the parchment paper and transfer the muffins to a wire rack to cool completely. Cooling on a wire rack ensures proper air circulation all around the muffins, preventing the bottoms from becoming soggy and helping to maintain that wonderfully light and fluffy texture throughout.

Tray of pumpkin muffins with streusel topping.

Meal Prep and Storage Tips for Lasting Freshness

These gluten-free almond flour pumpkin muffins are fantastic for meal prepping, ensuring you always have a wholesome snack or breakfast ready to go. Proper storage is key to maintaining their delicious flavor and texture:

  • Room Temperature Storage: Ensure your muffins are completely cooled before storing them. Once cool, place them in an airtight container at room temperature, where they will stay fresh and delicious for up to 3 days.
  • Refrigerator Storage: For an extended shelf life, store the completely cooled muffins in an airtight container in the refrigerator for up to 5 days.
  • Freezer Storage: These muffins are incredibly freezer-friendly! Once fully cooled, transfer them to freezer-safe zip-top bags or an airtight freezer container. They will maintain their quality and flavor in the freezer for up to 3 months. To enjoy, simply remove a muffin (or more!) from the freezer and let it defrost at room temperature for an easy, delicious treat. You can also gently warm it in a microwave or toaster oven for a fresh-baked feel.

Customization & Flavor Boosts for Your Pumpkin Muffins

While these healthy almond flour pumpkin muffins are absolutely perfect as they are, they also offer a wonderful canvas for culinary creativity! Don’t hesitate to experiment with various add-ins to tailor them precisely to your taste preferences:

  • Decadent Chocolate Chips: For a touch of indulgence, fold in a handful of dark chocolate chips. Opt for dairy-free chocolate chips if you want to keep the recipe entirely dairy-free. The melty pockets of chocolate are a fantastic contrast to the spiced pumpkin.
  • Crunchy Nuts: Beyond the pepitas in the streusel, consider adding chopped walnuts or pecans directly into the muffin batter. They provide an extra layer of crunch and a boost of healthy fats and flavor.
  • Sweet Dried Fruit: Introduce a lovely chewiness and natural sweetness by folding in dried cranberries, chopped dates, or golden raisins. These additions pair beautifully with the autumnal spices.
  • Amp Up the Spices: If you adore a bolder spice profile, feel free to increase the amounts of cinnamon, ginger, or nutmeg. For an intriguing exotic twist, a small pinch of ground cloves or cardamom can elevate the flavor even further.
  • Bright Citrus Zest: A teaspoon of fresh orange or lemon zest can truly brighten up the flavors of these muffins. The subtle citrusy note complements the richness of the pumpkin beautifully and adds a fresh aromatic lift.

Creative Ways to Utilize Leftover Pumpkin Puree

It’s common to have a little pumpkin puree leftover after opening a can. Rather than letting it go to waste, pumpkin is incredibly versatile and can add a fantastic nutritional boost to numerous dishes. Here are some excellent ideas to make the most of any remaining pumpkin puree:

  • Boost Your Morning Smoothie: Stir a spoonful or two of pumpkin puree into your favorite morning smoothie. It imparts a creamy texture, a mild earthy flavor, and a significant dose of vitamins and fiber without overpowering other ingredients. It’s particularly delicious in my chocolate cherry green smoothie!
  • Enhance Baked Oatmeal: For a hearty and nutritious breakfast, swap out some or all of the applesauce in this baked oatmeal recipe with your leftover pumpkin puree. It will add extra moisture, a lovely autumnal color, and a significant nutrient boost to your breakfast.
  • Flavorful Hummus: Believe it or not, pumpkin adds a wonderfully creamy texture and a subtle earthy sweetness to hummus. It works exceptionally well in both my low-carb cauliflower hummus or classic hummus, consistently yielding fantastic and unique results.
  • Creamy Blended Soups: Incorporate any leftover pumpkin puree into almost any blended soup you’re making, adding it before the final puree step. It will instantly add creaminess, richness, and an extra layer of depth to the flavor. Excellent options include carrot ginger soup, butternut squash soup, parsnip and kale soup, or even a robust black bean soup for an unexpected but delicious twist.
Pumpkin muffins with streusel topping on a round plate with blue cloth napkin.

These gluten-free almond flour pumpkin muffins are truly more than just a seasonal treat; they are a wholesome, satisfying, and incredibly easy addition to your healthy eating routine. Whether you choose to enjoy them as a quick and nutritious breakfast, a fulfilling afternoon snack, or a delightful healthy dessert, their rich flavor, fluffy texture, and appealing streusel topping are sure to impress both you and your loved ones. Don’t wait for the official start of fall – these healthy pumpkin muffins are perfect any time you’re craving a touch of comfort and goodness!

Discover More Healthy and Delicious Muffin Recipes

If you’ve fallen in love with these healthy almond flour pumpkin muffins and are eager for more delicious, wholesome baking ideas, we have a collection of other fantastic muffin recipes that are just as easy to make and satisfying to enjoy. Explore new flavors and textures to keep your healthy baking journey exciting!

  • Vegan Zucchini Muffins
  • Healthy Morning Glory Muffin Recipe
  • Vegan Apple Oatmeal Muffins
  • Gluten-free Banana Chocolate Chip Muffins

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📖 Recipe

Close up of a pumpkin muffin with streusel topping on a wire cooling rack

Pumpkin Muffins

Author:

Debra Klein
Grain-free Pumpkin Muffins with Streusel Topping. Super tasty with no added sugar and no flour. Meet your new breakfast bestie!





4.93 from 13 votes

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Prep Time

5 minutes

Cook Time

25 minutes

Total Time

30 minutes

Course
Breakfast
Cuisine
American

Servings

12
muffins
Calories

283
kcal

Equipment

  • Mixing bowls
  • Spatula
  • Vitamix
  • Parchment paper
  • Jelly Roll Pan
  • Muffin Pan

Ingredients

  

Muffins


  • 1
    cup
    pumpkin puree

  • 1
    cup
    almond flour

  • ½
    cup
    almond butter

  • ½
    cup
    ground flax

  • ½
    cup
    honey

  • 3
    large eggs

  • 1
    small apple
    cored and roughly chopped

  • 1
    teaspoon
    baking soda

  • 2
    teaspoons
    cinnamon

  • ½
    teaspoon
    ground ginger

  • ½
    teaspoon
    ground allspice

  • ¼
    teaspoon
    nutmeg

Streusel Topping


  • ½
    cup
    chopped pepitas
    pumpkin seeds

  • ½
    cup
    almond flour

  • 2
    Tablespoons
    honey

  • ½
    teaspoon
    cinnamon

  • ¼
    teaspoon
    ground allspice

Instructions

 

  • Preheat oven to 350°F (175°C). Cut ½” strips of unbleached parchment paper and line muffin tins with two strips, making an “X” shape in each cup. Dab a bit of water on the back of the parchment, if needed, to help it stay in place.
  • Place all muffin ingredients (pumpkin puree, almond flour, almond butter, ground flax, honey, eggs, cored and chopped apple, baking soda, cinnamon, ground ginger, ground allspice, nutmeg) into a blender. Blend well until smooth and creamy. Stop to scrape down the sides several times to ensure all ingredients are thoroughly incorporated into the batter.
  • In a small bowl, mix together all ingredients for the streusel topping (chopped pepitas, almond flour, honey, cinnamon, ground allspice) until well combined and crumbly.
  • Scoop the prepared muffin batter into the lined muffin tins. Evenly divide the batter among the 12 muffin cups, filling them almost to the top to ensure a generous muffin top.
  • Spoon the streusel topping onto the muffins. The streusel will be quite sticky; using damp hands can significantly help you distribute it more easily and evenly across each muffin.
  • Bake for 25-28 minutes, or until a toothpick inserted into the center of a muffin comes out clean. This indicates they are fully cooked.
  • Let the muffins cool in the tin for 15 minutes. This allows them to set. Then, gently lift the muffins out of the tin by gripping the ends of the parchment paper strips. Carefully peel off the parchment paper and allow the muffins to continue cooling completely on a wire rack to prevent sogginess.
  • Store at room temperature in an airtight container for up to 5 days, or in the freezer for up to 3 months for long-term freshness.

Notes

The streusel topping can be quite sticky. Either use a spoon or, for easier distribution, I found that wet hands will help you distribute it more easily.

Nutrition


Serving:
1
g


Calories:
283
kcal


Carbohydrates:
26
g


Protein:
9
g


Fat:
18
g


Saturated Fat:
2
g


Polyunsaturated Fat:
15
g


Cholesterol:
47
mg


Sodium:
128
mg


Fiber:
6
g


Sugar:
18
g
Note

The nutrition calculations were done using online tools. To obtain the most accurate representation of the nutritional information in any given recipe, you should calculate the nutritional information with the actual ingredients you used. You are ultimately responsible for ensuring that any nutritional information is accurate, complete and useful.



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