Decadent Vegan Double Chocolate Muffins: A Moist & Healthy Flaxseed Pumpkin Recipe
Prepare your taste buds for an unforgettable treat: these Vegan Double Chocolate Muffins are truly everything you’ve dreamed of and more. Imagine the rich, deep flavor of chocolate, intensified with a generous helping of chocolate chips, all nestled within a perfectly baked, fluffy muffin. It’s a chocolate lover’s paradise, but with a wholesome, plant-based twist.
Despite being 100% vegan, you’d never guess these muffins are dairy-free and egg-free. They boast an incredibly moist, fluffy, and decadently rich texture that’s pure bliss. Think ooey-gooey centers and perfectly crisp edges, all without being overly sweet. We achieve this delicate balance with just the right amount of maple syrup, harmonizing beautifully with the natural sweetness and moisture provided by a full can of pumpkin puree and the nutritional powerhouse of flaxseed. No more wondering what to do with that leftover small amount of pumpkin – this recipe uses it all! These Vegan Double Chocolate Flaxseed Pumpkin Muffins are more than just a recipe; they’re a must-make revelation.

If you’re searching for a super easy, pantry-friendly vegan breakfast muffin, you’ve arrived at the perfect destination! Chocolate enthusiasts, rejoice over this glorious double chocolate breakfast muffin. And for those moments when you’re craving some veggies in your morning bake, my vegan zucchini muffins offer a delicious alternative. Options are always a good thing, but today, we’re diving deep into rich chocolatey goodness.
Why You Will Love These Vegan Chocolate Muffins
- Irresistibly Delicious: With a double dose of chocolate from cacao powder and chocolate chips, these muffins satisfy even the most intense chocolate cravings. They are moist, tender, and perfectly sweet, without being cloying.
- Surprisingly Healthy: Packed with nutrient-rich ingredients like pumpkin puree and ground flaxseeds, these muffins offer a hidden boost of fiber and omega-3 fatty acids, making them a healthier choice than many traditional muffins.
- Diet-Friendly: Being completely vegan, they are naturally dairy-free and egg-free, making them suitable for those with dietary restrictions or anyone looking to incorporate more plant-based foods into their diet.
- Easy to Make: Using simple pantry staples and a straightforward mixing method, this recipe is perfect for bakers of all skill levels. Minimal effort yields maximum flavor!
- Versatile Treat: Ideal for breakfast, a quick snack, or even a healthier dessert. Enjoy them warm with a cup of coffee or as an afternoon pick-me-up.
Essential Ingredients for Your Double Chocolate Muffins
Crafting these delectable vegan muffins relies on a handful of straightforward pantry staples. Each ingredient plays a vital role in achieving their signature moist texture, rich flavor, and perfect rise. Here’s a closer look at what you’ll need and why it works:

- All-Purpose Flour: The foundation of our muffins, providing structure. For those with gluten sensitivities, a 1:1 gluten-free baking flour blend can be successfully substituted, ensuring your muffins are just as delightful.
- Cacao Powder: This is where the first layer of rich chocolate flavor comes from. Cacao powder is less processed than cocoa powder, retaining more nutrients and offering a deeper, more intense chocolate experience.
- Ground Flaxseeds: A vegan baking marvel! When mixed with liquid, ground flaxseeds create a gelatinous “flax egg” that acts as a superb binder, replacing traditional eggs. Plus, they contribute healthy omega-3 fatty acids and dietary fiber.
- Baking Soda & Baking Powder: These are our leavening agents. Baking soda reacts with acidic ingredients (like pumpkin and apple cider vinegar) to create carbon dioxide, giving the muffins their airy, fluffy texture. Baking powder provides an additional lift, ensuring a beautiful rise.
- Sea Salt: A pinch of salt is crucial for balancing the sweetness and enhancing all the chocolate flavors, preventing the muffins from tasting flat.
- Pumpkin Puree (15-oz can): This isn’t just for fall! Pumpkin puree is a fantastic secret ingredient for vegan baking. It adds incredible moisture, a subtle earthy sweetness, and a wealth of vitamins (especially Vitamin A) and fiber, all without adding a distinct “pumpkin” flavor to the final chocolate product. Using a whole can means no waste!
- Maple Syrup: Our natural sweetener of choice. Maple syrup offers a complex sweetness that refined sugar often lacks, complementing the chocolate and pumpkin beautifully while keeping the muffins moist.
- Unsweetened Applesauce: Another stellar ingredient for moisture and natural sweetness, applesauce also acts as a healthy fat replacement, helping to keep these muffins light yet incredibly tender.
- Almond Milk: The liquid component that brings everything together. Unsweetened almond milk is perfect for a neutral flavor, but any other plant-based milk like soy, oat, or cashew milk will work just as well. For an extra creamy touch, try homemade almond milk.
- Apple Cider Vinegar: This seemingly small addition is mighty. It reacts with the baking soda and baking powder, supercharging their leavening power and ensuring your muffins rise tall and fluffy. Don’t skip it!
- Dark Chocolate Chips: The “double” in double chocolate! These melt into pockets of gooey deliciousness throughout the muffins. Be sure to choose vegan-friendly chocolate chips to keep the recipe plant-based.
Step-by-Step Guide: Crafting Your Vegan Double Chocolate Muffins
Making these decadent vegan muffins is a surprisingly simple process, perfect for a weekend baking project or a quick weekday treat. Follow these detailed steps to achieve perfect results every time:
- Prepare Your Oven and Muffin Tins: Begin by preheating your oven to 325°F (160°C) on convection setting, or 350°F (175°C) for a regular bake. Convection baking often yields a more even bake and browning. Line your muffin tins with unbleached parchment paper liners. These prevent sticking and make for easy cleanup.
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Combine Dry Ingredients: In a spacious medium-sized mixing bowl, measure out your all-purpose flour (or gluten-free blend), ground flaxseed, cacao powder, baking powder, baking soda, and sea salt. Use a whisk or a fork to thoroughly stir these dry ingredients together. Ensure they are uniformly mixed to distribute the leavening agents and prevent pockets of unmixed flour in your final muffins.
Thoroughly Mix Dry Ingredients: Continue stirring the dry ingredients until they are perfectly combined and the cacao powder is fully incorporated, leaving no streaks of white flour. This step is crucial for an even rise and consistent flavor throughout your muffins.
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Mix Wet Ingredients: In a separate bowl, pour in your full 15-oz can of pumpkin puree, maple syrup, unsweetened applesauce, almond milk, and apple cider vinegar. Whisk these wet ingredients vigorously until they are thoroughly combined and smooth. This ensures an even distribution of moisture and flavor in your batter.
Combine Wet and Dry: Pour the wet pumpkin mixture into the bowl containing your dry ingredients. Using a spatula, gently mix until *just* combined. The key here is to avoid overmixing, which can lead to tough muffins. A few lumps are perfectly fine!
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Finish Mixing Gently: You may need to use your spatula to gently scrape the bottom of the bowl and pull up any remaining dry flour mixture, ensuring everything is incorporated. However, resist the strong urge to overmix, as this develops gluten and can result in dense, chewy muffins rather than light, fluffy ones.
Fold in Chocolate Chips: Once the batter is just combined, gently fold in the dark chocolate chips. Be careful not to aggressively stir, as this can collapse the delicate air bubbles you’ve created and negatively impact the muffin’s texture.
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Fill Muffin Tins: Using a large spoon or a cookie scoop, generously fill each parchment-lined muffin tin until all the batter has been evenly dispersed among the 12 cups. Filling them generously will result in those beautiful, domed muffin tops.
Bake to Perfection: Place the muffin tin into your preheated oven and bake for approximately 22 minutes. You’ll know they’re ready when a toothpick inserted into the center of a muffin comes out clean or with just a few moist crumbs attached.
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Initial Cooling: Carefully remove the muffin tin from the oven. Allow the muffins to cool slightly in the tin for about 5-10 minutes. Any exposed chocolate chips on top will be incredibly gooey and hot, so handle with care!
Transfer and Cool Completely: Gently transfer the muffins from the tin to a wire rack to continue cooling. Leaving them in the hot tin for too long will cause them to continue cooking, potentially drying them out or making them soggy on the bottom. Allow them to cool completely for the best texture and easier liner removal.
Debra’s Pro Tips for Perfect Vegan Muffins

- The Art of Not Overmixing: This is perhaps the most crucial tip for any muffin recipe, especially vegan ones. The combination of baking powder, baking soda, and apple cider vinegar works wonders to create a beautiful rise. Overmixing the batter can deflate those precious air bubbles, leading to dense, chewy muffins instead of light and fluffy ones. Mix only until the dry ingredients are just incorporated into the wet, even if a few small lumps remain.
- Patient Peeling for Liners: While it’s tempting to dive into a warm muffin right out of the oven, exercising a little patience will pay off. The parchment paper liners will peel off much more easily and cleanly once the muffins have had a chance to cool completely. Warm muffins tend to cling to their wrappers.
- Optimal Storage for Freshness: Once completely cool, store your vegan double chocolate muffins in an airtight container. They will remain wonderfully fresh and moist at room temperature for up to 5 days. If you wish to extend their freshness, transfer them to the refrigerator where they’ll last for up to 2 weeks. For longer storage, these muffins freeze beautifully for up to 3 months. To enjoy, simply thaw at room temperature or gently warm in the microwave.
- Flavorful Variations: Feel free to customize your muffins! Add a pinch of cinnamon or a dash of espresso powder to the dry ingredients for added depth. Stir in a handful of chopped walnuts or pecans for extra crunch and nutty flavor. A sprinkle of flaky sea salt on top before baking can also enhance the chocolate’s richness.
- Serving Suggestions: These muffins are incredibly versatile. Enjoy them as a quick and satisfying breakfast with your favorite cup of coffee or tea. They make a fantastic on-the-go snack for busy days. For a more indulgent treat, warm them slightly and serve with a scoop of vegan vanilla ice cream or a dollop of coconut whipped cream.
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📖 Recipe

Vegan Double Chocolate Flaxseed Muffins
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Equipment
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muffin tin
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parchment muffin liners
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Glass Mixing Bowls with Lids
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Cookie scoop set
Ingredients
- 3 cups all purpose flour
- ⅓ cup cacao powder
- ½ cup ground flax seeds
- 1 teaspoon baking soda
- 1 teaspoon baking powder
- ¼ teaspoon sea salt
- 1 15-oz can pumpkin puree
- ⅓ cup maple syrup
- ½ cup unsweetened apple sauce
- ½ cup almond milk
- 1 tblsp apple cider vinegar
- ½ cup dark chocolate chips
Instructions
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Preheat your oven to 325°F (160°C) for convection baking or 350°F (175°C) for a regular oven. Line a 12-cup muffin tin with unbleached parchment liners.
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In a large mixing bowl, whisk together the all-purpose flour, cacao powder, ground flax seeds, baking soda, baking powder, and sea salt until thoroughly combined.
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In a separate bowl, combine the pumpkin puree, maple syrup, unsweetened applesauce, almond milk, and apple cider vinegar. Mix well until smooth.
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Pour the wet ingredients into the dry ingredients. Use a spatula to mix until just combined. Be careful not to overmix; a few lumps are fine. Ensure you scrape the bottom to incorporate any dry flour.
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Gently fold in the dark chocolate chips, distributing them evenly throughout the batter without deflating it.
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Divide the batter evenly among the 12 prepared muffin tins, filling each cup generously for tall, domed tops.
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Bake in the preheated oven for 22 minutes, or until a toothpick inserted into the center of a muffin comes out clean.
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Let the muffins cool in the muffin tin for 5-10 minutes before gently transferring them to a wire rack to cool completely. Store cooled muffins in an airtight container at room temperature for up to 5 days, in the refrigerator for up to 2 weeks, or freeze for up to 3 months.
Nutrition
Note
The nutrition calculations were done using online tools. To obtain the most accurate representation of the nutritional information in any given recipe, you should calculate the nutritional information with the actual ingredients you used. You are ultimately responsible for ensuring that any nutritional information is accurate, complete and useful.